Evaluate PARROT Alignment Accuracy

Computes various accuracy metrics for PARROT alignment results

Usage

evaluate_parrot_accuracy(parrot_result, ground_truth, k = c(1, 5, 10))

Arguments

parrot_result

Result from parrot() function

ground_truth

Ground truth from generate_parrot_validation_data

k

Top-k accuracy levels to compute (default: c(1, 5, 10))

Value

A list with alignment accuracy metrics including hit rate at various k values

Examples

# \donttest{
vdata <- generate_parrot_validation_data(n_nodes = 20, n_anchors = 5)
# evaluate_parrot_accuracy(result, vdata$ground_truth)
# }