Benchmark token_ot_graph_align scalability on synthetic permuted graphs
Source:R/token_ot_graph_align_benchmark.R
benchmark_token_ot_graph_align_scalability.RdGenerates paired domains where the target is a permuted/noisy copy of the source and reports runtime and basic alignment accuracy as problem size grows.
Arguments
- sizes
Integer vector of node counts to benchmark.
- d
Integer feature dimension for synthetic node features.
- noise_sd
Numeric noise standard deviation added to target features.
- candidate_k
Integer number of candidates per source node.
- n_levels
Integer number of multilevel hierarchy levels.
- prior_mode
Prior lifting mode for multilevel (`"none"`, `"hard"`, `"soft"`).
- token_mode
Tokenization mode passed to [token_ot_graph_align_control()].
- views
Views passed to [token_ot_graph_align_control()].
- n_reps
Integer number of replications per size.
- seed
Integer seed for reproducibility.
- verbose
Logical; print per-run progress.