Plot Linked MFA Scores

Displays observations in the Linked MFA shared score space, optionally indicating block coverage.

Usage

# S3 method for class 'linked_mfa'
plot(
  x,
  dims = c(1, 2),
  show_coverage = TRUE,
  labels = FALSE,
  col = NULL,
  pch = 19,
  cex = 1,
  main = "Linked MFA Score Plot",
  ...
)

Arguments

x

An object of class `linked_mfa`.

dims

Integer vector of length 2 specifying which components to plot.

show_coverage

Logical; if `TRUE`, color points by number of blocks contributing to each observation.

labels

Logical; if `TRUE`, label points with row names or indices.

col

Point colors. Overrides `show_coverage` coloring if provided.

pch

Point character.

cex

Point size.

main

Plot title.

...

Additional arguments passed to [plot()].

Value

Invisibly returns the score matrix (for the plotted dimensions).