This function calculates contrasts for a fitted linear model.
Arguments
- lmfit
The fitted linear model object.
- conmat
The contrast matrix or contrast vector.
- colind
The subset column indices in the design associated with the contrast.
- se
Whether to compute standard errors, t-statistics, and p-values (default: TRUE).
Value
A list containing the following elements:
conmat
: Contrast matrix.sigma
: Residual standard error.df.residual
: Degrees of freedom for residuals.estimate
: Estimated contrasts.se
: Standard errors of the contrasts (ifse = TRUE
).stat
: t-statistics for the contrasts (ifse = TRUE
).prob
: Probabilities associated with the t-statistics (ifse = TRUE
).stat_type
: Type of the statistics calculated.