This function smooths a volumetric image (3D brain MRI data) using a bilateral filter. The bilateral filter considers both spatial closeness and intensity similarity for smoothing.
Arguments
- vol
A
NeuroVol
object representing the image volume to be smoothed.- mask
An optional
LogicalNeuroVol
object representing the image mask that defines the region where the filtering is applied. If not provided, the entire volume is considered.- spatial_sigma
A numeric value specifying the standard deviation of the spatial Gaussian kernel (default is 2).
- intensity_sigma
A numeric value specifying the standard deviation of the intensity Gaussian kernel (default is 25).
- window
An integer specifying the number of voxels around the center voxel to include on each side. For example, window=1 for a 3x3x3 kernel (default is 1).
Value
A smoothed image of class NeuroVol
.
Examples
brain_mask <- read_vol(system.file("extdata", "global_mask.nii", package="neuroim2"))
# Apply bilateral filtering to the brain volume
filtered_vol <- bilateral_filter(brain_mask, brain_mask, spatial_sigma = 2,
intensity_sigma = 25, window = 1)