Package index • fmrihrf

All functions

HRF(): HRF Constructor Function

HRF_GAMMA() HRF_GAUSSIAN() HRF_SPMG1() HRF_SPMG2() HRF_SPMG3() HRF_BSPLINE() HRF_FIR(): Pre-defined Hemodynamic Response Function Objects

acquisition_onsets(): Get fMRI Acquisition Onset Times

amplitudes(): Get amplitudes from an object

block_hrf(): Create a Blocked HRF Object

blockids(): Get block identifiers

blocklens(): Get block lengths

deriv(<HRF>): Default derivative method for HRF objects

deriv(): Compute derivatives of HRF functions

deriv(<SPMG1_HRF>): Derivative method for SPMG1 HRF

deriv(<SPMG2_HRF>): Derivative method for SPMG2 HRF

deriv(<SPMG3_HRF>): Derivative method for SPMG3 HRF

durations(): Get durations of an object

evaluate(<HRF>): Evaluate an HRF Object

evaluate(): Evaluate a regressor object over a time grid

gen_hrf(): Construct an HRF Instance using Decorators

gen_hrf_blocked() hrf_blocked(): Generate a Blocked HRF Function

gen_hrf_lagged() hrf_lagged(): Generate a Lagged HRF Function

getHRF(): Get HRF by Name

global_onsets(): Convert onsets to global timing

hrf_basis_lwu(): LWU HRF Basis for Taylor Expansion

hrf_bspline(): B-spline HRF (hemodynamic response function)

hrf_bspline_generator(): Create B-spline HRF Basis Set

hrf_daguerre_generator(): Create Daguerre HRF Basis Set

hrf_fir_generator(): Create FIR HRF Basis Set

hrf_fourier(): Fourier basis for HRF modeling

hrf_fourier_generator(): Create Fourier HRF Basis Set

hrf_from_coefficients(): Combine HRF Basis with Coefficients

hrf_gamma(): Gamma HRF (hemodynamic response function)

hrf_gaussian(): Gaussian HRF (hemodynamic response function)

hrf_half_cosine(): Hemodynamic Response Function with Half-Cosine Basis

hrf_inv_logit(): hrf_inv_logit

hrf_lwu(): Lag-Width-Undershoot (LWU) HRF

hrf_mexhat(): Mexican Hat HRF (hemodynamic response function)

hrf_sine(): hrf_sine

hrf_spmg1(): hrf_spmg1

hrf_tent_generator(): Create Tent HRF Basis Set

hrf_time(): HRF (hemodynamic response function) as a linear function of time

hrf_toeplitz(): HRF Toeplitz Matrix

lag_hrf(): Lag an HRF Object

list_available_hrfs(): List all available hemodynamic response functions (HRFs)

make_hrf(): Create an HRF from a basis specification

nbasis(): Number of basis functions

neural_input(): Generate Neural Input Function from Event Timing

normalise_hrf(): Normalise an HRF Object

onsets(): Get event onsets from an object

penalty_matrix(): Generate penalty matrix for regularization

plot(<HRF>): Plot an HRF Object

print(<Reg>) print(<sampling_frame>): Print method for Reg objects

reconstruction_matrix(): Combine HRF Basis with Coefficients

regressor(): Construct a Regressor Object

regressor_design(): Build a Design Matrix from Block-wise Onsets

regressor_set() evaluate(<RegSet>): Construct a Regressor Set

samples(): Get sample acquisition times

sampling_frame(): A sampling_frame describes the block structure and temporal sampling of an fMRI paradigm.

shift(): Shift a time series object

single_trial_regressor(): Create a single trial regressor