Create a minimal HDF5 file suitable for H5ParcellatedMultiScan examples — create_minimal_h5_for

This function creates a temporary HDF5 file with a minimal but valid structure for an H5ParcellatedMultiScan, including a master mask, master cluster definitions, one H5ParcellatedScan, and one H5ParcellatedScanSummary.

Usage

create_minimal_h5_for_H5ParcellatedMultiScan(
  file_path = NULL,
  master_mask_dims = c(5L, 5L, 4L),
  num_master_clusters = 3L,
  n_time_run1 = 10L,
  n_time_run2 = 12L
)

Arguments

file_path: Optional: path to HDF5 file. If NULL, a temp file is created.
master_mask_dims: 3D dimensions for the master mask, e.g., c(5L, 5L, 4L).
num_master_clusters: Integer, number of clusters in the master cluster map.
n_time_run1: Integer, n_time for the first (full) run.
n_time_run2: Integer, n_time for the second (summary) run.

Value

Path to the created HDF5 file.