Package index • fmrilss

All functions

LSSBeta: LSSBeta object
VoxelHRF: VoxelHRF object
benchmark_mixed_solve(): Benchmark Mixed Model Implementations
calculate_recovery_metrics(): Calculate HRF Recovery Metrics
compare_hrf_recovery(): Compare HRF Recovery Methods
create_lwu_grid(): Create LWU HRF Grid for OASIS Search
estimate_voxel_hrf(): Estimate Voxel-wise HRF Basis Coefficients
fit_oasis_grid(): Fit OASIS with HRF Grid Search
fmrilss_options: Option constructors for nested interfaces
generate_lwu_data(): Generate Synthetic fMRI Data with LWU HRF
generate_rapid_design(): OASIS HRF Recovery Testing Functions
item_build_design(): Build ITEM design metadata
item_compute_u(): Compute ITEM trial covariance matrix
item_cv(): Crossvalidated ITEM decoding
item_fit(): Fit ITEM decoder weights
item_from_lsa(): Build an ITEM bundle from LS-A estimates
item_predict(): Predict targets from ITEM weights
item_slice_fold(): Slice an ITEM bundle into train/test fold objects
lsa(): Least Squares All (LSA) Analysis
lss(): Least Squares Separate (LSS) Analysis
lss_beta_cpp(): Vectorized LSS Beta Computation Using C++
lss_cpp_optimized(): A wrapper for the optimized C++ LSS implementation
lss_design(): LSS Analysis with fmridesign Objects
lss_fit_wrappers: Convenience wrappers for modern lss() usage
lss_naive(): Naive Least Squares Separate (LSS) Analysis
lss_naive_fit(): Naive LSS with modern signature
lss_optimized(): Optimized LSS Analysis (Pure R)
lss_optimized_fit(): Optimized LSS with modern signature
lss_sbhm(): End-to-End LSS with Shared-Basis HRF Matching (SBHM)
lss_sbhm_design(): SBHM Pipeline with fmridesign Models
lss_with_hrf(): Perform LSS using Voxel-wise HRFs
mixed_precompute(): Precompute Workspace for Optimized Mixed Model
mixed_solve() mixed_solve_cpp(): Mixed Model Solver
mixed_solve_optimized(): Optimized Mixed Model Solver
oasis_options(): Construct OASIS options
plot_hrf_comparison(): Plot HRF Recovery Comparison
prewhiten_options(): Construct prewhitening options
project_confounds(): Project Out Confound Variables
project_confounds_cpp(): Project Out Confounds Using C++
sbhm_build(): Build a Shared-Basis HRF Library (SBHM)
sbhm_hrf(): Wrap a Learned Basis as an HRF (SBHM HRF)
sbhm_match(): Match Voxels to Library HRFs in Shared Basis (SBHM)
sbhm_prepass(): SBHM Prepass: Aggregate Fit in Shared Basis
sbhm_project(): Project Trial-wise SBHM Coefficients to Scalar Amplitudes
stglmnet_options(): Construct stglmnet backend options