Smooth a surface image with mri_surf2surf.
Usage
ni_freesurfer_surface_smooth(
hemi,
in_file,
subject_id,
args = NULL,
cortex = TRUE,
fwhm = NULL,
out_file = NULL,
reshape = NULL,
smooth_iters = NULL,
.cwd = NULL,
.env = NULL,
.engine = NULL,
.profile = NULL,
dry_run = FALSE,
echo = interactive()
)Arguments
- hemi
Character; one of: "lh", "rh". hemisphere to operate on Required.
- in_file
Character; file path. source surface file Required.
- subject_id
Character. subject id of surface file Required.
- args
Character. Additional parameters to the command
- cortex
Logical. only smooth within
$hemi.cortex.label- fwhm
Numeric. effective FWHM of the smoothing process
- out_file
Character; file path. surface file to write
- reshape
Logical. reshape surface vector to fit in non-mgh format
- smooth_iters
Integer. iterations of the smoothing process
- .cwd
Working directory override.
- .env
Named character vector of environment variables.
- .engine
Execution engine override.
- .profile
Runtime profile override.
- dry_run
Logical; preview command without executing.
- echo
Logical; echo stdout/stderr in real time.