This program segments the corpus callosum into five separate labels in
Usage
ni_freesurfer_segment_cc(
in_file,
in_norm,
out_rotation,
subject_id,
args = NULL,
out_file = NULL,
.cwd = NULL,
.env = NULL,
.engine = NULL,
.profile = NULL,
dry_run = FALSE,
echo = interactive()
)Arguments
- in_file
Character; file path. Input aseg file to read from subjects directory Required.
- in_norm
Character; file path. Required undocumented input {subject}/mri/norm.mgz Required.
- out_rotation
Character; file path. Global filepath for writing rotation lta Required.
- subject_id
Character. Subject name Required.
- args
Character. Additional parameters to the command
- out_file
Character; file path. Filename to write aseg including CC
- .cwd
Working directory override.
- .env
Named character vector of environment variables.
- .engine
Execution engine override.
- .profile
Runtime profile override.
- dry_run
Logical; preview command without executing.
- echo
Logical; echo stdout/stderr in real time.