Uses mri_parse_sdcmdir to get information from dicom directories
Usage
ni_freesurfer_parse_dicom_dir(
dicom_dir,
args = NULL,
dicom_info_file = "dicominfo.txt",
sortbyrun = NULL,
summarize = NULL,
.cwd = NULL,
.env = NULL,
.engine = NULL,
.profile = NULL,
dry_run = FALSE,
echo = interactive()
)Arguments
- dicom_dir
Character; directory path. path to siemens dicom directory Required.
- args
Character. Additional parameters to the command
- dicom_info_file
Character; file path. file to which results are written
- sortbyrun
Logical. assign run numbers
- summarize
Logical. only print out info for run leaders
- .cwd
Working directory override.
- .env
Named character vector of environment variables.
- .engine
Execution engine override.
- .profile
Runtime profile override.
- dry_run
Logical; preview command without executing.
- echo
Logical; echo stdout/stderr in real time.