For a single subject, produces an annotation file, in which each
Usage
ni_freesurfer_mr_is_ca_label(
canonsurf,
classifier,
curv,
hemisphere,
smoothwm,
subject_id,
sulc,
args = NULL,
aseg = NULL,
label = NULL,
out_file = NULL,
seed = NULL,
.cwd = NULL,
.env = NULL,
.engine = NULL,
.profile = NULL,
dry_run = FALSE,
echo = interactive()
)Arguments
- canonsurf
Character; file path. Input canonical surface file Required.
- classifier
Character; file path. Classifier array input file Required.
- curv
Character; file path. implicit input {hemisphere}.curv Required.
- hemisphere
Character; one of: "lh", "rh". Hemisphere ('lh' or 'rh') Required.
- smoothwm
Character; file path. implicit input {hemisphere}.smoothwm Required.
- subject_id
Character. Subject name or ID Required.
- sulc
Character; file path. implicit input {hemisphere}.sulc Required.
- args
Character. Additional parameters to the command
- aseg
Character; file path. Undocumented flag. Autorecon3 uses ../mri/aseg.presurf.mgz as input file
- label
Character; file path. Undocumented flag. Autorecon3 uses ../label/{hemisphere}.cortex.label as input file
- out_file
Character; file path. Annotated surface output file
- seed
Integer
- .cwd
Working directory override.
- .env
Named character vector of environment variables.
- .engine
Execution engine override.
- .profile
Runtime profile override.
- dry_run
Logical; preview command without executing.
- echo
Logical; echo stdout/stderr in real time.