Convert different transformation formats.
Usage
ni_freesurfer_lta_convert(
in_fsl,
in_itk,
in_lta,
in_mni,
in_niftyreg,
in_reg,
args = NULL,
invert = NULL,
ltavox2vox = NULL,
out_fsl = NULL,
out_itk = NULL,
out_lta = NULL,
out_mni = NULL,
out_reg = NULL,
source_file = NULL,
target_conform = NULL,
target_file = NULL,
.cwd = NULL,
.env = NULL,
.engine = NULL,
.profile = NULL,
dry_run = FALSE,
echo = interactive()
)Arguments
- in_fsl
Character; file path. input transform of FSL type Required.
- in_itk
Character; file path. input transform of ITK type Required.
- in_lta
Character or numeric vector. input transform of LTA type Required.
- in_mni
Character; file path. input transform of MNI/XFM type Required.
- in_niftyreg
Character; file path. input transform of Nifty Reg type (inverse RAS2RAS) Required.
- in_reg
Character; file path. input transform of TK REG type (deprecated format) Required.
- args
Character. Additional parameters to the command
- invert
Logical
- ltavox2vox
Logical
- out_fsl
Character or numeric vector. output transform in FSL format
- out_itk
Character or numeric vector. output transform in ITK format
- out_lta
Character or numeric vector. output linear transform (LTA Freesurfer format)
- out_mni
Character or numeric vector. output transform in MNI/XFM format
- out_reg
Character or numeric vector. output transform in reg dat format
- source_file
Character; file path
- target_conform
Logical
- target_file
Character; file path
- .cwd
Working directory override.
- .env
Named character vector of environment variables.
- .engine
Execution engine override.
- .profile
Runtime profile override.
- dry_run
Logical; preview command without executing.
- echo
Logical; echo stdout/stderr in real time.