Concatenates two consecutive LTA transformations into one overall
Usage
ni_freesurfer_concatenate_lta(
in_lta1,
in_lta2,
args = NULL,
invert_1 = NULL,
invert_2 = NULL,
invert_out = NULL,
out_file = NULL,
out_type = NULL,
subject = NULL,
tal_source_file = NULL,
tal_template_file = NULL,
.cwd = NULL,
.env = NULL,
.engine = NULL,
.profile = NULL,
dry_run = FALSE,
echo = interactive()
)Arguments
- in_lta1
Character; file path. maps some src1 to dst1 Required.
- in_lta2
Character or numeric vector. maps dst1(src2) to dst2 Required.
- args
Character. Additional parameters to the command
- invert_1
Logical. invert in_lta1 before applying it
- invert_2
Logical. invert in_lta2 before applying it
- invert_out
Logical. invert output LTA
- out_file
Character; file path. the combined LTA maps: src1 to dst2 = LTA2*LTA1
- out_type
Character; one of: "VOX2VOX", "RAS2RAS". set final LTA type
- subject
Character. set subject in output LTA
- tal_source_file
Character; file path. if in_lta2 is talairach.xfm, specify source for talairach
- tal_template_file
Character; file path. if in_lta2 is talairach.xfm, specify template for talairach
- .cwd
Working directory override.
- .env
Named character vector of environment variables.
- .engine
Execution engine override.
- .profile
Runtime profile override.
- dry_run
Logical; preview command without executing.
- echo
Logical; echo stdout/stderr in real time.