ANTS WarpTimeSeriesImageMultiTransform — ni_ants_warp_time_series_image_multi

Warps a time-series from one space to another

Usage

ni_ants_warp_time_series_image_multi_transform(
  input_image,
  transformation_series,
  args = NULL,
  dimension = 4,
  out_postfix = "_wtsimt",
  reference_image = NULL,
  reslice_by_header = NULL,
  tightest_box = NULL,
  use_bspline = NULL,
  use_nearest = NULL,
  .cwd = NULL,
  .env = NULL,
  .engine = NULL,
  .profile = NULL,
  dry_run = FALSE,
  echo = interactive()
)

Arguments

input_image: Character; file path. image to apply transformation to (generally a coregistered functional) Required.
transformation_series: Character or numeric vector. transformation file(s) to be applied Required.
args: Character. Additional parameters to the command
dimension: Character; one of: "4", "3". image dimension (3 or 4)
out_postfix: Character. Postfix that is prepended to all output files (default = _wtsimt)
reference_image: Character; file path. reference image space that you wish to warp INTO
reslice_by_header: Logical. Uses orientation matrix and origin encoded in reference image file header. Not typically used with additional transforms
tightest_box: Logical. computes tightest bounding box (overridden by reference_image if given)
use_bspline: Logical. Use 3rd order B-Spline interpolation
use_nearest: Logical. Use nearest neighbor interpolation
.cwd: Working directory override.
.env: Named character vector of environment variables.
.engine: Execution engine override.
.profile: Runtime profile override.
dry_run: Logical; preview command without executing.
echo: Logical; echo stdout/stderr in real time.

Value

An ni_result object.