Converts AFNI format files to NIFTI format. This can also convert 2D or
Usage
ni_afni_afn_ito_nifti(
in_file,
args = NULL,
denote = NULL,
newid = NULL,
oldid = NULL,
out_file = NULL,
pure = NULL,
.cwd = NULL,
.env = NULL,
.engine = NULL,
.profile = NULL,
dry_run = FALSE,
echo = interactive()
)Arguments
- in_file
Character; file path. input file to 3dAFNItoNIFTI Required.
- args
Character. Additional parameters to the command
- denote
Logical. When writing the AFNI extension field, remove text notes that might contain subject identifying information.
- newid
Logical. Give the new dataset a new AFNI ID code, to distinguish it from the input dataset.
- oldid
Logical. Give the new dataset the input datasets AFNI ID code.
- out_file
Character; file path. output image file name
- pure
Logical. Do NOT write an AFNI extension field into the output file. Only use this option if needed. You can also use the 'nifti_tool' program to strip extensions from a file.
- .cwd
Working directory override.
- .env
Named character vector of environment variables.
- .engine
Execution engine override.
- .profile
Runtime profile override.
- dry_run
Logical; preview command without executing.
- echo
Logical; echo stdout/stderr in real time.