Skip to contents

Materialise a plan into a realised GDS

Usage

compute(
  x,
  sink = c("memory", "h5"),
  path = NULL,
  sink_options = list(),
  block = NULL,
  assays = NULL,
  ...
)

Arguments

x

Plan or source

sink

Storage sink ("memory" for in-memory data, "h5" to write a GDS HDF5 store)

path

Output path when sink = "h5"

sink_options

Optional list of sink-specific options

block

Optional list specifying block indices to request from the adapter

assays

Optional character vector to return raw arrays instead of GDS object

...

Reserved for future use

Value

A realised gds object